BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D03LP1|AL430212
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1795 0.0
>3x_Contig1727
Length = 17872
Score = 1795 bits (905), Expect = 0.0
Identities = 919/923 (99%), Gaps = 1/923 (0%)
Strand = Plus / Minus
Query: 1 gatctcttaacagttaccagatgctctttagctgctgtaag-tttgataaggtttcagtt 59
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6522 gatctcttaacagttaccagatgctctttagctgctgtaagctttgataaggtttcagtt 6463
Query: 60 acctcattactgtcttcatatttagaattcagctcttctaattgtttatcaatagcttta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6462 acctcattactgtcttcatatttagaattcagctcttctaattgtttatcaatagcttta 6403
Query: 120 acgtctgtctctaataagttcacactattcgctagagtatccaaataatactctagtttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6402 acgtctgtctctaataagttcacactattcgctagagtatccaaataatactctagtttt 6343
Query: 180 gttgttccttgctgttcctcatttgctgcgtatataataagttcagcaggcttctgaagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6342 gttgttccttgctgttcctcatttgctgcgtatataataagttcagcaggcttctgaagc 6283
Query: 240 acctgaatagtggactcaagttcttttgtaatatgcccactgtaatagtccatttttgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6282 acctgaatagtggactcaagttcttttgtaatatgcccactgtaatagtccatttttgaa 6223
Query: 300 agtagactagagcaattggtcttcaattcttctaattggcttgtctggaaagatgataac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6222 agtagactagagcaattggtcttcaattcttctaattggcttgtctggaaagatgataac 6163
Query: 360 aatatgtcgacgaatgcttgaggtacaaaatcatcatcgaaaaacatgtctagcaaaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6162 aatatgtcgacgaatgcttgaggtacaaaatcatcatcgaaaaacatgtctagcaaaggg 6103
Query: 420 tcattagcaccagatatccttctactcatcgtgtaggaaattatagtgctatatcgtcct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6102 tcattagcaccagatatccttctactcatcgtgtaggaaattatagtgctatatcgtcct 6043
Query: 480 tcaaaggtgatttggtggcttacttgggtgtttcatgatcatcatatttagaggtagaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6042 tcaaaggtgatttggtggcttacttgggtgtttcatgatcatcatatttagaggtagaag 5983
Query: 540 gttaacttcttcattttgatgttaagatttcaagatgatttttggtgccttcagatgcac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5982 gttaacttcttcattttgatgttaagatttcaagatgatttttggtgccttcagatgcac 5923
Query: 600 agtaagaaaggtttaaaagagaaggatacaatatcaaagcagatattactatacacattg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5922 agtaagaaaggtttaaaagagaaggatacaatatcaaagcagatattactatacacattg 5863
Query: 660 atgagagcaacgtatggataatttattggactatatatgggtataattctatttacaatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5862 atgagagcaacgtatggataatttattggactatatatgggtataattctatttacaatt 5803
Query: 720 ctattgcttctcttttagactggacgacaaatcagtatttcaatagcataccattttttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5802 ctattgcttctcttttagactggacgacaaatcagtatttcaatagcataccattttttc 5743
Query: 780 cgacgcaccaaacattttgatgtgattcatcaacacagaaatcagtcacttcatcataag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5742 cgacgcaccaaacattttgatgtgattcatcaacacagaaatcagtcacttcatcataag 5683
Query: 840 gacgaattagatgtgtaagcttattgaaattgaatttcccgtccaaaacaggtacattga 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5682 gacgaattagatgtgtaagcttattgaaattgaatttcccgtccaaaacaggtacattga 5623
Query: 900 aagcraattgggacccactagaa 922
|||| |||||| ||||||||||
Sbjct: 5622 aagcaaattggaccccactagaa 5600
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7899
Number of Sequences: 1807
Number of extensions: 7899
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)